Reconstruction of Dynamical Systems Without Time Label

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Abstract

In this paper, we study the method to reconstruct dynamical systems from data without time labels. Data without time labels appear in many applications, such as molecular dynamics, single-cell RNA sequencing, etc. Reconstruction of dynamical system from time sequence data has been studied extensively. However, these methods do not apply if time labels are unknown. Without time labels, sequence data become distribution data. Based on this observation, we propose to treat the data as samples from a probability distribution and try to reconstruct the underlying dynamical system by minimizing the distribution loss, sliced Wasserstein distance more specifically. Extensive experiment results demonstrate the effectiveness of the proposed method.

Author Biographies

  • Zhijun Zeng
    Department of Mathematical Sciences, Tsinghua University, China
  • Chenglong Bao

    Yau Mathematical Sciences Center, Tsinghua University, China

    Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, China

  • Pipi Hu
    Microsoft Research AI4Science, China
  • Yi Zhu

    Yau Mathematical Sciences Center, Tsinghua University, China

    Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, China

  • Zuoqiang Shi

    Yau Mathematical Sciences Center, Tsinghua University, China

    Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, China

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DOI

10.4208/cicp.OA-2025-0042

How to Cite

Reconstruction of Dynamical Systems Without Time Label. (2026). Communications in Computational Physics, 39(3), 941-968. https://doi.org/10.4208/cicp.OA-2025-0042